Mouse-V1-07

Posted on Dec 23, 2016 UTC and closed Jan 3, 2017 UTC

Status

Closed

Details

Description:

Animal Type: Mouse

Brain Region: Primary Visual Cortex

Estimated hours to finish: Unknown

Total Volume (in μm): 866.4 x 864.8 x 82.04

Results

Date: Jan 4, 2017 UTC

This is an aspiny cell with poor image/cell quality and lots of axon. As with the cell above, I think some amount of missed signal could have been captured if I had been leaving comments for the past two weeks. There is more missed dendrite than in a typical case (5 large segments). The axon is about 50% complete. There are numerous axon segments that ARE captured, but only as a series of dots (not a continuous line). There is also a lot of false positive signal throughout the consensus. I attribute this to the overall poor quality of the image/cell; low signal-to-noise is very difficult to reconstruct. I would not expect the results to improve much with training for cells of this quality. All that being said, I would STILL rather start with this consensus than the autotrace. You can see from the MIP that even the dendrites are much more difficult to discern for this cell than previous cells.

Traces

Colors

Dendrite

Axon

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